Dr. Bradley HemmingerResearch Projects |
Hemminger's home website |
NeoRef
NeoRef is an archive for any digital material including articles,
research notes, books, genetic sequences, concepts, and for derived data including
indexing, reviews, claims. Areas of emphasis include optimization
of the author self contribution process (user interface, selection and
assignment of index terms from controlled vocabularies), automatic
metadata extraction from existing materials,
optimization of user interfaces for searching from very large
content sets (federated universal open archives), and extending
metadata to include "claims" to capture higher level knowledge
representations about linkages between content items (in
particular extending the ScholOnto work to the domain of
bioinformatics). We also study the technical and policy issues involved
with freely available archives of all scholarly literature that
allow for the storage, searching and retrieval of information without the
need for the traditional framework of publishers and review systems.
NeoRef Scholarly Communications ,
NeoRef general presentation
Digital Libraries
Dr. Hemminger helped found The Center for Research and Development
of Digital Libraries
(CRADLE) in 2002,
and currently serves as the organizer of the group. This project
brings together many active digital library
researchers and projects at UNC and worldwide. He is also interested
in Electronic Theses and Disserations. He has developed a ETD for
SILS scholarly literature (part of NeoRef), and leads the campus group
charged with investigating and implementing ETDs for UNC.
ETDs
User Interface Design
Development of computer workstations as the display interfaces for the practice
of medicine, and in particular, radiology. Previous work includes design principles
for radiology workstation design, and specific designs and implementations (chest
CT, mammography, 3D). Current interests include (1) investigating what
choices of mental models and roam and zoom techniques are most effective when
using images larger than the display resolution, and (2) effective
CHI techniques for dynamic searching of very large sets of content items
(ie. universe of scholarly publications).
Bioinformatics
Ultrastructure: Working with Mike Giddings and Jeff Long to study the application of
Ultrastructure, a novel notational system to represent knowledge
in a flexible way using relational databases, to bioinformaticss
to represent and integrate current and future information
information from all genome sciences domains.
Mouse Database: working with Terry Magnuson, Jay Vivian and Yijing Chen to design and implement a database for their mouse mutation project. The challenge is to track the clone (created from frozen library, mutagenized with ENU) associated with phenotype changes.
Proteomics Database: Project with Marshall Pope and Christoph Borchers of the Proteomics Core Facility to develop standardized interchange of proteomics experimental data.
Plant Comparative Genetics: Project with Todd Vision of Biology to investigate database design for storage and query when doing comparative genome studies. The long range intent to have comparative measure of the tree of life.
Virseum
I have proposed a methodology for digitally
capturing both the content and entire exhibits of museums, so that
they can be visited in a
virtual reality setting. The virtual reality representation is
unique in that the environments and objects are captured and
displayed in way that is both visually compelling (photographic
quality), and spatial accurate (millimenter measurements are
possible). This work is in conjunction with 3rdTech, who developed
the DeltaSphere digitizer.
Virseum
Medical Informatics
Digital Imaging and Communications (DICOM) standards work. Dr. Hemminger
chairs Working Group 11 (Display), and is an active member and author in
Working Groups 15 (Digital Xray, Mammo, Computer Aided Detection), Working
Group 17 (3D), AAPM Task group 18 (Electronic Display). For a
listing of existing DICOM international standards and new
standards under development see the DICOM website at NEMA.
Databases
Integating disparate databases. Handling very large databases. Primary emphasis
is on biological databases (genetics, protoemics, metabolomics).
Datamining
Knowledge discovery via data mining of large and integrated databases. Application
of statistical pattern recognition and feature analysis techniques to the analysis
of genomic and proteomic databases.